load a VCF (variant) track provided as a Bioconductor VariantAnnotation object — loadVcfTrack • igvShiny

load a VCF (variant) track provided as a Bioconductor VariantAnnotation object

Usage

loadVcfTrack(session, id, trackName, vcfData, deleteTracksOfSameName = TRUE)

Arguments

session: an environment or list, provided and managed by shiny
id: character string, the html element id of this widget instance
trackName: character string
vcfData: VariantAnnotation object
deleteTracksOfSameName: logical, default TRUE

Value

nothing

Examples

library(igvShiny)
demo_app_file <-
  system.file(package = "igvShiny", "demos", "igvShinyDemo-withVCF.R")
if (interactive()) {
  shiny::runApp(demo_app_file)
}